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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7044799 chr9:100665393 A/T FAM81A chr15:59664892-59815748:+ -0.26 -6.02 3.39E-9 Box Plot
THCA rs7045138 chr9:100591463 C/T NKX6-1 chr4:85413140-85419603:- 0.36 6.18 1.39E-9 Box Plot
THCA rs7045465 chr9:100534823 A/T BMPR1A chr10:88516358-88692595:+ -0.24 -6.04 3.09E-9 Box Plot
THCA rs7045465 chr9:100534823 A/T CLDN2 chrX:106143394-106174091:+ 0.26 5.99 4.09E-9 Box Plot
THCA rs7045465 chr9:100534823 A/T EML5 chr14:89078775-89259096:- 0.28 6.16 1.5E-9 Box Plot
THCA rs7045465 chr9:100534823 A/T EPDR1 chr7:37723446-37991543:+ 0.32 6.99 9.18E-12 Box Plot
THCA rs7045465 chr9:100534823 A/T GGT5 chr22:24615622-24641110:- 0.27 6.05 2.88E-9 Box Plot
THCA rs7045465 chr9:100534823 A/T LRRC42 chr1:54411750-54433841:+ -0.23 -5.88 7.88E-9 Box Plot
THCA rs7045465 chr9:100534823 A/T NKX6-1 chr4:85413140-85419603:- 0.48 8.13 3.65E-15 Box Plot
THCA rs7048255 chr9:100665698 A/G FAM81A chr15:59664892-59815748:+ -0.26 -6.02 3.39E-9 Box Plot
THCA rs705696 chr12:56480648 G/A RPS26P11 chrX:71264395-71264742:+ 0.52 8.99 5.79E-18 Box Plot
THCA rs705698 chr12:56384687 A/G RPS26P11 chrX:71264395-71264742:+ 0.47 8.09 4.81E-15 Box Plot
THCA rs705700 chr12:56389293 T/C RPS26P11 chrX:71264395-71264742:+ 0.62 12.13 1.0E-29 Box Plot
THCA rs705702 chr12:56390636 C/T RPS26P11 chrX:71264395-71264742:+ -0.49 -8.67 6.6E-17 Box Plot
THCA rs70600 chr17:44860021 C/T C17orf69 chr17:43716341-43723594:+ 0.55 12.01 3.31E-29 Box Plot